Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEFTDRNYTLVTEFILLGFPTRPELQIVLFLMFLTLYAIILIGNIGLMLLIRIDPHLQTPMYFFLSNLSFVDLCYFSDIVPKMLVNFLSENKSISYYGCALQFYFFCTFADTESFILAAMAYDRYVAICNPL-LYTVVMSRGICMRLIVLSYLGGNMSSLVHTSFAFILKYCDKNVINHFFCDLPPLLKLSCTDTTINEWLLS--TYGSSVEIICFIIIIISYFFILLSVLKIRSFSGRKKTFSTCASHLTS----------------------VTIYQGTLLFIYSRPSYLYSPNTDKIISVFYTIFIPVLNPLIYSLR-NKDVKDAAEKVLRSKVDSS----------------------------- |
4XNV Chain:A ((38-382)) | --------SFKCALTKTGF-----QFYYLPAVYILVFIIGFLGNSVAIWMFVFHMKPWSGISVYMFNLALADFLYVLTLPALIFYYFNKTDWIFGDAMCKLQRFIFHVNLYGSILFLTCISAHRYSGVVYPKSLGRLKKKNAICISVLVWLIVVVAISP--------ILFYSGTGVRKN--------KTITCYDTTSDEYLRSYFIYSMCTTVAMFCVPLVLILGCYGLIVRALIYKMKKYTCTVCGYIYNPEDGDPDNGVNPGTDFKDIVCPLCGVGKDQFEEVEEPLRRKSIYLVIIVLTVFAVSYIPFHVMKTMNLRARLDFQTPAMCAFNDRVYATYQVTRGLASLNSCVNPILYFLAGDTFRRR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XNV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -176034 for 1901 contacts (-92.6/contact) +
2D Compatibility (PS) -28650 + (NN) -632 + (LL) 1668
1D Compatibility (HY) -20400 + (ID) 2450
Total energy: -226498.0 ( -119.15 by residue)
QMean score : 0.082
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