Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MARTVNVLLPLPIDQLFSYAVKENTDVSVGDYVVVPFGKKRLIGIVWKYSNKNDQELKFIEQKINLPNIRLKLIAFAEWVAQYNVISIGMLAKVIMGGVLKVNHLDKLVHVEQEQEVSEINYQLNPEQQIASNKIISNLNEYSVTLLDGETGSGKTEVYLSVIAQLIKNYSSTPATPNAARTLSFQCPDTQLYKHCNLGPPVGYHPSTLILGSSFPRNLIKNVHFNVRAATPIPSLQTKFLDSSVSYLHDIFMFKAKPTIIFNTLSSPSAGMTPKYVETASNKGSIQVLILLPEIVLTSQLVNRIRSQTSR----NLAEWHSGLTLKTRRNNWLNTANGNAQIIIGARSALFL--------PYKNLKLIIVDEEHDSSFKQEQGTIYNARDMAIILA-----KIENIPIILSSATPLLETIYHVKN--GNYNYVKLAKRFGGA--ELPLI--KVVDTRNNKQWISNELFEGIKQTI---EKKQQVMLFLNRRGYAQLAVCKKCGYKIPCSNCAVWLVYHKKKNALLCHHCSYQLKLPEKCSNCQSKQSLFLYGIGIERLLEETVKLIP-NAKTAIISSDQK--SVSNVIDLVLKEELNIIIGTQIIAKGHNFPKLTLVGVINADLSLENADLRAAEKTYQLLHQVAGRSGRFNEKGMVIVQTNHPESSVIKALQHQKRDSFYEIELESRYKAKMPPFSRLIALIICGKNQIATQKAANEIASFLHNQCLSKKLPSSSSLSFQCLTLKSRKKEFEILGPSPAAISFLNNKYRYRVLLKIYNKHSLSVQKKLKYWIKNCNLSPNIIVTIDVDPISFF |
| 3SQW Chain:A ((94-407)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YMVKAVIVAPTRDLALQIEAEVKKIHDMNYGLKKYACVSLVGGTDFRAAMNKMNKLRPNIVIATPGRLIDVLEKYSNKFFRFVDYKVLDEADRLLEIGFR-DDL--ETISGILNEKNSKSADNIKTLLFSATLDDKVQKLANNIMNKKECLFLDTVDKNEPEAHERIDQSVVISEKFANSI-FAAVEHIKKQIKERDSNYKAIIFAPTVKF-------------------------------------------------------------TSFLCSILKNEFKKDLPILEFHGKITQNKRTSLVKRFKKDESGILVCTDVGARGMDFPNVHEVLQIGVPSEL------------ANYIHRIGRTARSGKEGSSVLFICKDELPFVRELEDAKNIVIAKQEKYEPSEEIKSEVLEAVTEEPEDISDIVISLISSYRSCIKEYRFSERRILPEIASTYGVLLNDPQLKIPVSRRFLDKLGLSRSPIGKAMFEIR-------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SQW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -151223 for 2202 contacts (-68.7/contact) +
2D Compatibility (PS) -30825 + (NN) -7406 + (LL) 27188
1D Compatibility (HY) -7200 + (ID) 2400
Total energy: -171866.0 ( -78.05 by residue)
QMean score : 0.407
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