Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVQHLTAEEIIQYISDAKKSTPIKVYLNGNFEGITYPESFKVFGSEQSKVIFCEADDWKPFYEAYGSQFEDIEIEMDRRNSAIPLKDLTNTNARIEPGAFIREQAIIEDGAVVMMGATINIGAVVGEGTMIDMNATLGGRATTGKNVHVGAGAVLAGVIEPPSASPVIIEDDVLIGANAVILEGVRVGKGAIVAAGAIVTQDVPAGAVVAGTPAKVIKQASEVQDTKKEIVAALRKLND
4M99 Chain:C ((94-206))
----------------------------------------------------------------------------------------------IHPDATVSPSAIIGQGSVVMAKAVVQAGSVLKDGVIVNTAATVDHDCLLDAFVHISPGAHLSGNTR--------IGEESRIGTGACSRQQTTVGSGVTAGAGAVIVCDIPDGMTVAGNPAK------------------------
General information:
TITO was launched using:
RESULT:
Template:
4M99.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -129251 for 955 contacts (-135.3/contact) +
2D Compatibility (PS) -12321 + (NN) -2547 + (LL) 8752
1D Compatibility (HY) -3600 + (ID) 2050
Total energy: -141017.0 ( -147.66 by residue)
QMean score : 0.524
(partial model without unconserved sides chains):
PDB file :
Tito_4M99.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4M99-query.scw
PDB file :
Tito_Scwrl_4M99.pdb
: