Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFTIDFSDHTGLVKDAWYKQIEDLLEFAKKEEHIEDDAELSVTFVDKQEIQEINRTYRDKDKVTDVISFALEEDEPEIDFSGLDIPRVLGDIIICTDVAQEQANNYGHSFERELGFLALHGFLHLLGYDHMTEADEKEMFGRQDTILNAYGLTRD
1OZ9 Chain:A ((8-148))
KNRVLVKLKKRKVR---KDKIEKWAELALSALGLNN-VELSVYITDDQEIRELNKTYRKKDKPTDVLSFPMGEEFGG--------YKILGDVVISQDTAERQARELGHSLEEEVKRLIVHGIVHLLGYDHEKGGEEEKKFRELENYVLSKLSK--
General information:
TITO was launched using:
RESULT:
Template:
1OZ9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61186 for 1059 contacts (-57.8/contact) +
2D Compatibility (PS) -15485 + (NN) -9256 + (LL) 536
1D Compatibility (HY) -8400 + (ID) 2600
Total energy: -96391.0 ( -91.02 by residue)
QMean score : 0.508
(partial model without unconserved sides chains):
PDB file :
Tito_1OZ9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OZ9-query.scw
PDB file :
Tito_Scwrl_1OZ9.pdb
: