Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLISIAFLLVLCLLNYSSFRMLKSFLTLKKISRYAYLGFFILLSAGEATFVFYR------NVMPSHLF-VLTSACSFVSF-IAFVFSLSFYGFSYSVEKIDFLPSRRKGLKNFLRIGFYLALLGYFWRGFYEGLARPKIKETPIYLDKLD-KELKIILLTDMHVGSLLQKDFVNYIVEEVNQKEVDMVLIGGDLVDENIEKVKSFLLPLNNLKSTHGTFYVPGNHEYYHGIEPILSFLNTLDMTIL-GNECVH-LGGINLCGVYDYFARKR--QDFAPDIDKALKKRDSSKPTILLAHQPKQIRSLKESHSIDLVLSGHTHAGQIFPFSLLVKLAQTYLHGLYKHSGTTQIYVSSGAGYWGIPLRFLA--PSEIAYLRLLPKNQA |
| 4Q0W Chain:A ((1-362)) | -------------GVHSFWDIAGPTARPVRLESLE--DKRMAVDASIWIYQFLKAVRDQNAVKNSHITGFFRRICKLLYFGIRPVFVFDGGVPVLKRETIRQRKERRQGKRE-------------------DEVTMDMIKEVQELLSRFGIPYITAPMEAEAQCAELLQLNLVDGIITDDS----DVFLFGGTKIYKNM-----------FHEKNYVEFYDAESILKLLG----LDRKNMIELAQLLGSDYTNGLKGMGPVSSIEVIAEFGNLKNFKDWYNNGQFDKRKQETE---NKFEKDLRKKLVNNEIILDDDFPS-----------VMVYDAYMRPEVDHDTTPFVWGVPDLDMLRSFMKTQLGWPHEKSDEILIPLI-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q0W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -140771 for 2325 contacts (-60.5/contact) +
2D Compatibility (PS) -31430 + (NN) 1097 + (LL) 7252
1D Compatibility (HY) -10000 + (ID) 2650
Total energy: -176502.0 ( -75.91 by residue)
QMean score : 0.195
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