Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNEAIERRDDDMTIVSFEVEISAPIQEVFALLTTNTGLAKWFNELEVGELGADGYLLFVMTPEEKITMPIRAFEPNQKLAFEWDQDE---------VAFELNEITANKTRLTFTEQLTTITEHSPRDISGWHICLKKLQASAEGKIYDFNKTEFKTLFAKYQKELNIEK
2LAK Chain:A ((1-160))
----MEKAMPESFVVRREAHLAAPPAAVFALMTDPEKILRWMGTEAEVEPEPGGLYLVNVTGARFARGSFREVVPVHRLAYSFGWDGSEVVPPGSSLVEIDLIEQGGGTLLRLTHSGLPSAEQCAGHEEGWAHYLGRLTEVAAGR--DPGPDPFYGRRLEHHHHHH---
General information:
TITO was launched using:
RESULT:
Template:
2LAK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8540 for 911 contacts (-9.4/contact) +
2D Compatibility (PS) -15560 + (NN) 4503 + (LL) 1044
1D Compatibility (HY) -2800 + (ID) 1600
Total energy: -22953.0 ( -25.20 by residue)
QMean score : 0.317
(partial model without unconserved sides chains):
PDB file :
Tito_2LAK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LAK-query.scw
PDB file :
Tito_Scwrl_2LAK.pdb
: