Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------------------------------------------------------------------MADISKELIEQLVKQVVLEKMGQSSKHVDPSGILSVKLPVVKVSEEDRL-DTGNPSDVVYTKDLVTLEESKRLGFGLMEMKDTTFDWFLDYDEVD-YVIEGRLDVVI-DGRTVSAGPGEIIFIPKGSQIKFSVTGEARFIYVTYPADWQS |
| 3MYX Chain:A ((4-238)) | QPTVLLLARADLSPVGTEFTTGPIDAHDPFDSGRRTAFVDEQGIAAGIVEFGTALSVEAYPYTEMLVMHRGSVTLTSGTDSVTLSTGESAVIGRGTQVRIDAQPESLWAFCASTQASGPDKSGITALDRLALLTPSSPPDPSIMISPLPQ---CRSNNLFEDTASTLRIGVWDSTPYERISRPHKIHELMNLIEGRVVLSLENGSSLTVNTGDTVFVAQGAPCKWTSTGYVRKFYAVT------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MYX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -30046 for 861 contacts (-34.9/contact) +
2D Compatibility (PS) -14543 + (NN) 2130 + (LL) 484
1D Compatibility (HY) 0 + (ID) 850
Total energy: -42825.0 ( -49.74 by residue)
QMean score : 0.340
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