Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGKIAPSILSADFATLARDIKEVENCGADYIHIDVMDGHFVPNITFGPAVVQAIRPETKLP--LDVHLMIENPDTYIPEFAKAGADYITVHVEACTHLHRTLQLIRSYGVKAGAVLNPATPIDVLQHVLNELDMVLFMTVNPGFGGQKFIPEVLEKISAFKEIVDKKGLDIEIEVDGGVDHETAKLCRDAGANVFVAGSYIYGNKNRQTPIDKLRAIVGE
3OVR Chain:B ((6-219))
--KIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIKPGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLR----TQFPSLDIEVDGGVGPDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVCSE
General information:
TITO was launched using:
RESULT:
Template:
3OVR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -176854 for 1825 contacts (-96.9/contact) +
2D Compatibility (PS) -23310 + (NN) -9760 + (LL) 460
1D Compatibility (HY) -20800 + (ID) 4400
Total energy: -234664.0 ( -128.58 by residue)
QMean score : 0.585
(partial model without unconserved sides chains):
PDB file :
Tito_3OVR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OVR-query.scw
PDB file :
Tito_Scwrl_3OVR.pdb
: