Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMKTNDVLLRNVTKVVAFIIFLFSLHLFFAGHYNPG----GGFVAGLTTAGAITLTLLAYDTKTVASMLNINTIMLTGVGLVFALGTGMIGIFTGDPFLTHKFGHVDLPILGDTALHTATLFDLG--------------VYLVVVGV---------TLTIIQTIGESD-----------------
1QF6 Chain:A ((63-242))
---KDEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVIDNGFYYDVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSWHEARETFANR--GESYKVSILDENIAHDDKPGLYFHEEYVDMCRGPHVPNMRFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKR
General information:
TITO was launched using:
RESULT:
Template:
1QF6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -96186 for 965 contacts (-99.7/contact) +
2D Compatibility (PS) -14472 + (NN) -3674 + (LL) 664
1D Compatibility (HY) 1600 + (ID) 750
Total energy: -112818.0 ( -116.91 by residue)
QMean score : 0.120
(partial model without unconserved sides chains):
PDB file :
Tito_1QF6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QF6-query.scw
PDB file :
Tito_Scwrl_1QF6.pdb
: