Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNFEKIETAYELILENIQTIENQLKTHIYDALIEQNSYYLGSSCDLDIVVVNNQKLRQLDLSQEEWRRTFQFIFIKSAQTEQLQANHQFTPDSIGFILLFLLEELTSQETVDVLEIGSGTGNLAQTLLNNSSKELNYMGIEVDDLLIDLSASIAEIIGSSAQFIQEDAVRPQI-LKESDVIISDLPIGYYPNDDIAKRYAVSSSKEHTYAHHLLMEQSLKYLKKDGIAIFLAPENLLTSP--QSDLLKEWLKGYADVIAVLTLPETIFGS-RQNAKSIFVLKKQAEQKPETFVYPLTDLQNRENMANFIENFQKWSRENSHYSKNMIE |
| 1YUB Chain:A ((9-180)) | -------------------------------------------------------------------------------------QNFLTSEKVLN---QIIKQLNLKETDTVYEIGTGKGHLTTKLAKI---SKQVTSIELDSHLFNLSSEKLKLN-TRVTLIHQDILQFQFPNKQRYKIVGNIPYHLSTQ---------------------IIKKVVFESRA-SDIYLIVEEGFYKRTLDIHRTLGLLLHTQVSIQQLLKLPAECFHPKPKVNSVLIKLTRHTTDVPDKYWKLYTYFVSKWVNREYRQLFTKNQFHQAMKHAKVNN |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YUB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -76827 for 1277 contacts (-60.2/contact) +
2D Compatibility (PS) -16772 + (NN) 1003 + (LL) 9748
1D Compatibility (HY) -10800 + (ID) 1600
Total energy: -95248.0 ( -74.59 by residue)
QMean score : 0.345
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