Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------MKKHSILLVDGYNMIAF----------------WKDTRQLFKSNRLEEAR-EVLLRKLNHYAHFEHIDIICVFDAQYVPGVRQRYDQYKISVIFTEEDETADSYIERAAAELNQ-SVLNLVSVATSD-----------------LNEQWTIFSQGTLRVSARELEQRVATVKSDLDKMSSQIDLSTPKLR--PWNDEQLGKLKDFLDGM--------- |
| 4OHC Chain:A ((10-230)) | TGYDRQSISDTTAKILLEVQAVHFNAEKPFIFTSGWASPVYIDCRKLISYPRVRRALMEMAETTITRDIGFEQIDAVAGGETAGIPFAAWIADRMMVPMQYVRKKPKGFGRNAQIEGHLEEGSRVLLVEDLTTDSRSKINFVNALRTAGATVNHCFVLFHYNIFKESVSVLK----DIDVDLHALATWWDVLRVAKASGYFETKTLDEVEKFLHAPAEWSAAHGG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OHC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -49758 for 1257 contacts (-39.6/contact) +
2D Compatibility (PS) -17839 + (NN) -5391 + (LL) 556
1D Compatibility (HY) -7600 + (ID) 1450
Total energy: -81482.0 ( -64.82 by residue)
QMean score : 0.289
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