Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKRHFETTRRIVIKVGTSSLVQTSGKINLSKIDHLAFVISSLMNRGMEVILVSSGAMGFGLDILKMDKRPQEISQQQAVSSVGQ---VAMMSLYSQIFSHYQTHVSQILLTRDVVVFPE-SLQNVTNSFESLLSMGILPIVNENDAVSVDEMDHKTKFGDNDRLSAVVAKITKADLLIMLSDIDGLFDKNPNIYDDAVLRSHVSEITD-DIIKSAGGAGSKFGTGGMLSKIKSAQMVFDNNGQMILMNGANPRDILKVLDGH--NIGTYFAQGK
2AKO Chain:A ((2-251))--------KRIVVKVGSHVISEEN-TLSFERLKNLVAFLAKLME-KYEVILVTSAAISAGHTKLDIDRKN--LINKQVLAAIGQPFLISVYNELLAKFNKLGGQI---LLTGKDFDSRKATKHA-KNAIDMMINLGILPIINENDA---TAI-EEIVFGDNDSLSAYATHFFDADLLVILSDIDGFYDKNPSEFSDAKRLEKITHIKEEWL----------HGTGGIVTKLKAAKFLLEHNKKMFLASGFDLSVAKTFLLEDKQIGGTLFE---


General information:
TITO was launched using:
RESULT:

Template: 2AKO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -132145 for 1946 contacts (-67.9/contact) +
2D Compatibility (PS) -25783 + (NN) -15173 + (LL) 1736
1D Compatibility (HY) -20800 + (ID) 3850
Total energy: -196015.0 ( -100.73 by residue)
QMean score : 0.426

(partial model without unconserved sides chains):
PDB file : Tito_2AKO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2AKO-query.scw
PDB file : Tito_Scwrl_2AKO.pdb: