Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MASIIYSPKDIFEQDFKVSMRGYDKKEVDVFLDDVIKDYENYLEQIEKLQMENRRLQQALDKKESE----ASNVRNSGTAMYNQKPIAQSATNFDILKRISRLEKEVFGRQIRE-
2L3N Chain:A ((1-104))
SVSILRSSV----------NHREVDEAIDNILRYTNSTEQQFLEAMESTGGRVRIAIAKLLSKQTSGGSGGSKLGGSGGS-RKDLSVKGMLYDSDSQQILNRLRERVSGSTAQSA
General information:
TITO was launched using:
RESULT:
Template:
2L3N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 10857 for 515 contacts (21.1/contact) +
2D Compatibility (PS) -10279 + (NN) -2848 + (LL) 976
1D Compatibility (HY) 1200 + (ID) 950
Total energy: -1044.0 ( -2.03 by residue)
QMean score : 0.373
(partial model without unconserved sides chains):
PDB file :
Tito_2L3N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2L3N-query.scw
PDB file :
Tito_Scwrl_2L3N.pdb
: