Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFNIILAMVCALIGLIIGYVAISMKMKSSKEAAELTLLNAEQDAVDLRGKAEIEAEHIRKAAERESKAHQKELLLEAKEEARKYREEIEKEFKSDRQELKQMEARLTDRASSLDRKDENLSNKEKMLDSKEQSLTDKSRHINEREQEIATLETKKVEELSRIAELSQEEAKDIILADTEKDLAHDIATRIKEAEREVKDRSNKIAKDLLAQAMQRLAGEYVTEQTITTVHLPDDNMKGRIIGREGRNIRTLESLTGIDVIIDDTPEVVVLSGFDPIRREIARMTLESLIQDGRIHPARIEELVEKNRLEMDQRIREYGEAAAYEIGAPNLHPDLIKIMGRLQFRTSYGQNVLRHSVEVGKLAGILAGELGENVDLARRAGFLHDMGKAIDRE-------------------VEGSHVEIGMEFARK-YKEHP-IVVNTIASHHGDVEPDSVIAVIVAAADALSSARPGARNESMENYIKRLRDLEEIANGFEGVQNAFALQAGREIRIMVQPGKVSDDQVVIMSHKVREKIEQNLDYPGNIKVTVIREMRAVDFAK |
| 2O08 Chain:A ((15-137)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LTEHRYQHTIGVMETAIDLAKLYGADQQKAELAAIFHDYAKFRDKNEMRTLIREKLSQQDILFYGDELLHAPCGAYYVREEVGIEDEDVLQAIRFHTTGRPNMSLLEKIIFLADYIEPNRQFPGVEKVRTQAKTDLNGAIISSLVNTITFLLKKNQPIYPDTLATYNQLLLEQ------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2O08.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -38386 for 763 contacts (-50.3/contact) +
2D Compatibility (PS) -11041 + (NN) -7634 + (LL) 32496
1D Compatibility (HY) -3200 + (ID) 1200
Total energy: -28965.0 ( -37.96 by residue)
QMean score : 0.406
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