Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------MTNEKGIVFNIQH----FSIHDGPGIRTTV--------FLKGCP-----------LRCPWCANPESQKMVPETMRDAITNESVIVG-------EEKSVDDIIEEVLKDIDFYEESGGGITLSGGEIFAQFEFAKAILKRAKSLGIHTAIETTAYTRHEQFVDLIQYVDFIYTDLKHYNSLKHQEKTMVK----NASIIKNIHYAFANGKTIVLRIPVIPNFNDSLEDAEEFACLFDRLDIRQVQLLPFHQFGQN--KYRLLNRQYEMEEIAALHPEDL----LDYQAIFSKYNIHCYF-------------------------- |
| 3EB8 Chain:A ((53-399)) | AEKHSEKKLMDSFSPSLSQDKMDGEFAHANIDGISIRLCLNKGICSVFYLDGDKIQSTQLSSKEYNNLLSSLPPKQFNLGKVHTITAPVSGNFKTHKPAPEVIETAINCCTSIIPNDDYFHVKDTDFNSVWHDIYRDIRASDSNSTKIYFNNIEI--PLKLIADLINE---LGINEFIDSK---KELQMLSYNQVNKIINSNFPQQDLCFQTEKLLFTSLFQDPAFISALTSAFWQSLHIT-----------SSSVEHIYAQIMSENIENRLNFMPEQRVINNCGHIIKINAVRAYEVSSSILPSHITCNGVGINKIETSYLVHAGTLPSSEGLRNAIPPESRQVSFAIISPD |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EB8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -62023 for 1579 contacts (-39.3/contact) +
2D Compatibility (PS) -25698 + (NN) -4342 + (LL) 1236
1D Compatibility (HY) -14000 + (ID) 2150
Total energy: -106977.0 ( -67.75 by residue)
QMean score : 0.279
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