Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MCKYKAIIFDMDGVLFDTELFYYKRRERFLKQHGITIDH-LPMNFFIGGNMKQVWKSVLGDQY-DTWDIDKLQQDYSRYKEDNPLPYKDLIFQDCKRVIEKLHHKGYLLGLASSSTRHDIMLALESFNLDTYFKVILSGEEFSESKPNPAIYNRAAELLDIPKQQILIVEDSEKGITAGIAAGIDVWAIEDK-YFGM-NQSQANVLVSDLSQFFVKLDNY
1TE2 Chain:A ((7-221))
-RQILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRRNELPDTLGLRIDMVVDLWYARQPWNGPSRQEVVERVIARAISL-VEETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTELTAKDLLG
General information:
TITO was launched using:
RESULT:
Template:
1TE2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -108445 for 1801 contacts (-60.2/contact) +
2D Compatibility (PS) -22695 + (NN) -9501 + (LL) 68
1D Compatibility (HY) -9600 + (ID) 2450
Total energy: -152623.0 ( -84.74 by residue)
QMean score : 0.559
(partial model without unconserved sides chains):
PDB file :
Tito_1TE2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TE2-query.scw
PDB file :
Tito_Scwrl_1TE2.pdb
: