Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDVSSSPNITFMLQYTEANPQYVDYTNREEAVKID--EELSLETNRQMIEGLTEDELTRIQEAVPET-QLNFREYIDYMNRSYA-----------------TEEQSKELTA-----IFTQEADYLQ--KLRLIDLKNKLE-SAYQNGSLLWQGVISFDNAFLAEQGLYDVATGQVDQKAIKAVMRDMMPTLI-----------QKEGLSDSAF--WWGNIHLNTDNIHIHFGLSEVES--------------NREKIFYQPRGRMEYKGNFSQ---KTINRFKSGVYHGLLKEET-------------------------RSNLLRKEQILANLKADFITSIYQKDKITSSAEKNFLEQAYNHLPLNKKWR--------YGSNARDF-AVSKFFLDRYLDSYLNNEG-----------------------SAAYQEFLKETRDFLQTYEGVYSAEKNKIYEKLRKVDGQTIRTLAESKGYDLEHHLARRVMDL--RERLANNILRSFREAAPQIQDVQLEKNLESFSVLNQKK-------------ILEQHPEASV---------VKSQK---------------AWQKLGYFVKAGE-QPLEIIRPVYKSYDKHGKGI-GRPEFVSD---------TVYDISQLTENIQLK------SLTLKD-----LSLFSSNELKELVDAAKLKT--NPTERERRELGTY-----RYALKLSILESSQKE------LQVRQKLLEQVQPLASDQPFLDFKKQLI---------AQELQAIALQLTPNYKLSEDDKALKNRLKRQFEDSVALPVS---KATPGAIQLPIRQLWT------------ELGLVHHIQDENILTLLKGTSTTKQAYIEELQTHISIF--------------------QLKYQINNRNKQISQLSDEA-----------TIKEMRIANAKGFSELKRLYDT--LQPSDDGQNQISQAVSKQLQERKVIKKAQLQQTQRSGKINTDFMRQLTASLNRSQQASKKALMERARSDEREEQEERRQAQR------------------------------------ |
| 4XC8 Chain:A ((42-1113)) | ---GPANKVRFVTAASLFDGHDASINIMRRILQSQGCEVIHLGHNRSVQEVVTAALQEDVQGIAISSYQGGHVEYFKYMIDLLREHGGEHIQVFGGGGGVIVPDEIRELQAYGVARIYSPEDGQRMGLAGMITDMAQRCDIDLTRYAPTTLDTVVAGDRRALA-QLITALENGKADPELVSALHAQAKAAAVPVLGITGTGGAGKSSLTDELIRRFRLDQDDALSIAVISIDPSRRKSGGALLGDRIRMNAINHPNIFMRSLATREAGSEISQALPDVIAACKAARFDLVIVETSGIGQGDAAIVPHVDLSLYVMTPEFGAASQLEKIDMLDF--ADFVAINKFDRKGAQDAWRDVAKQVQRN---REQWHSRAEDMPVYGTQASRFNDDGVTMLYQGLVGALGARGMSLKPGTLPNLEGRISTGQNVIVPPARSRYLAELADTVRAYHRRVVAQSKLARERQQLRAAHDMLQGAGHESAALETLASERDVSLGAVERKLLAMWPQMQQAYSGDEYVEIRTGLISTTLSGTKIRKVVLPRFEDEGEILKWLMRENVPGSFPYTAGVFAFKREGEDPTRMFAGEGDAFRTNRRFKLVSEGMEAKRLSTAFDSVTLYGEDPHERPDIYGKVGNSGVSIATLEDMKVLYDGFDLTNPSTSVSMTINGPAPTILAMFMNTAIDQQIDRFRADNGRDPTADEEAKIRAWVLQNVRGTVQADILKEDQGQNTCIFSTEFSLKVMGDIQEYFVHHQVRNFYSVSISGYHIAEAGANPISQLAFTLANGFTYVEAYLARGMHID-DFAPNLSFFFSNGMDPEYSVLGRVARRIWAVTMRDKYGANDRSQKLKYHIQTSG--RSLHAQEIDFNDIRTTLQALIAIYDNCNSLHTNAYDEAITTPTAESVRRALAIQLIINREWGVAKCENPNQGSFLIEELTDLVEEAVLQEFERIAERGGVLGAMETGYQRGKIQEESLYYEQLKHDGTLPIIGVNTFRNPNGDPRSSEDEKQSQLHRLTEFHGAHQADAEAMLARLRQAVIDNRNVFAVLMDAVRVCSLGQITHALFEVGGQYRRNM |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XC8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 115252 for 5447 contacts (21.2/contact) +
2D Compatibility (PS) -82753 + (NN) -25317 + (LL) 1360
1D Compatibility (HY) -17600 + (ID) 7150
Total energy: -16208.0 ( -2.98 by residue)
QMean score : 0.253
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