Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MVTVILAEKETQAAAYAESLGPASKKGKVHIIKHTPYFSDEVHVIAA-EGHLFE-------YGLPKDNWDL-----DKLPLVDVSFKQTLKQDKV----------SKEIFKQIYQEVTAADQVIIGTDSDREGERIAYSILSHIPEGKNKVTKRLWVNSLTTRALQKAFQNLREPIETYNYYLEAEARAQSDWLVGMNLSPLVTLELQKRGRLPKGKGNSLSVGRVQTPGVRLICENDLAIQNFRPETYWKLQLQDKETEISFSNKEKYSDSELILAQARQLKAISIVSSVEMEEKQRAAPHLFNLSDIQGLAAKQWGFEPTKTERLIESLYLKKYLSYPRTDTRFITEEEFDYLKNYLKSYQEVINCSFEAVNLEPRENYVNPEKVAKTSHYALIPTENIPNLVTLKPDERLIYEAVVRRTLLMFAADCRYSTTTVEVENQGLVFKTTGRQMFD-PGWAAFSQQKLKGDIELPDYRVGDQIETKVIIVEGMTKPPKRITESQLISDILPKYGLGTQATRATMLQTIQDRGYITKDKKTGQLFPTNKAYLLIHYLYD--NEFASPETTGGWELFLSQIGEGEINPREFVDAIKEKLAAQIAVVKERSD |
| 4DDU Chain:A ((2-1103)) | AVNSKYHHSCINCGGLNTDERNERGLPCEVCLPEDSPSDIYRALLERKTLKEYRFYHEFWNEYEDFRSFFKKKFGKDLTGYQRLWAKRIVQGKSFTMVAPTGVGKTTFGMMTALWLARKGKKSALVFPTVTLVKQTLERLQKLADEKVKIFGFYSSMKKEEKEKFEKSFEEDDYHILVFSTQFVSKNREKLSQKRFDFVFVDDVDAVLKASRNIDTLLMMVGIPEEIIRKAFSTIKQGKIYERPKNLKPGILVVSSATAKPRGIRPLLFRDLLNFTVGRLVSVARNITHVRISSRSKEKLVELLEIFRDGILIFAQTEEEGKELYEYLKRFKFNVGETWSEFEKNFEDFKVGKINILIGVQAYYGKLTRGVDLPERIKYVIFWGTPSMRFSLELDKAPRFVLARVLKEMGLIKAQENPDVEELRKIAKEHLTQKEFVEKVKEMFRGVVVKDEDLELIIPDVYTYIQASGRSSRILNGVLVKGVSVIFEEDEEIFESLKTRLLLIAEEEIIEEAEANWKELVHEVEESRRRSERELTDTSRSLLIIVESPTKAETLSRFLGRASSRKERNIIVHEAVTGEGVILFTATRGHVYDLVTKGGIHGVEEENGKFVPVYNSLKRCRDCGYQFTEDRDECPVCSSKNIDDKTETLRALREISLEADEILVATDPDVEGEKISWDVTQYLLPSTRSL-RRIEMHEITRYGFKKARESVR-FVDFNLVKAQIVRRVQDRWI-GFELSGKLQKRFGR---------SNLSAGRVQSTVLGWIVEREEEYKKS-EKDFTLLVLENG---VNLEVEGKIADD-----------VVTVVELQEAEEEKNPLP-PYTTSSALSEISQKLRLGVQEVMDILQDLFEKGFITYHRTDSTRISLEGQNVARTYLRKIGKEDIFMGRSWSTEGAHEAIRPVKPIDARELEEMIEEGLIA--DLTKKHLRVYELIFNRFLASQSAAVKVKKQIVTVDVDGKRMGIEQIVEILRDGWNLFVPLTVSPRFEHRTYKIKEKKFYK-------KHTVPLFTQASIVEEMKKR-GIGRPSTYAKIVEVLFRRGYVYEDKY-KRVRPTRFGVMVYSYLKERYEKYVTEETTRRLEEIMDKVERGEEDYQATLRLLYEEIKSLMEE------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DDU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -83628 for 4294 contacts (-19.5/contact) +
2D Compatibility (PS) -56971 + (NN) -7050 + (LL) 3928
1D Compatibility (HY) -26400 + (ID) 5450
Total energy: -175571.0 ( -40.89 by residue)
QMean score : 0.347
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