Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MARPLVEQTADRLLHLILEREYPVGAKLPNEYELAEDLDVGRSTIREAVRSLATRNILEVRQGSGTYISSKKGVSEDPLGFSLIKDTDRLTSDLFELRLLLEPRIAELVAYRI-TDDQLQLLEKLVGDIEDAVHA-GDPKHLLLDVEFHSMLAKYSGNIAMDSLLPVINQSIHLINANYTNRQMKSDSLEAHREIIKAIREKNPVAAHDAMLMHIMSVRRSALKA
3IHU Chain:A ((16-218))
---SASDTVFFGIMSGLELGTFVPGQRLV-ETDLVAHFGVGRNSVREALQRLAAEGIVDLQRHRGAVIRRLS---------------LQETLDVLDVAERMTGLLARAATRGSGNQPQVQALRASVQALVAAEKAQDGETFSNARRHFYRTLLEMGDNRELRRLFPTIHMPIVHAQH--RLASLRQMRLDDYRRIATAVLAGEPDAAEAAGAAHVKNVRGAILDR
General information:
TITO was launched using:
RESULT:
Template:
3IHU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -96327 for 1590 contacts (-60.6/contact) +
2D Compatibility (PS) -22032 + (NN) -13133 + (LL) 792
1D Compatibility (HY) -3600 + (ID) 2150
Total energy: -136450.0 ( -85.82 by residue)
QMean score : 0.567
(partial model without unconserved sides chains):
PDB file :
Tito_3IHU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IHU-query.scw
PDB file :
Tito_Scwrl_3IHU.pdb
: