Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKKNKVFLGVLLVLVVILGGGVLFYQSQFQKTTNQALAIAYKDAKVAKKDVIHQKIDKEFENFRGSYEIEFNTKSAEYSYHVDAKTGQILERDMDNNGFSKSTSQSSSSSSQKSHKISQEEAKKIAFKDANIEESEVSNLKIKEEIENGKSVYDIDFVDLKNKNEVDYQIDAETGKIIERSRDHMND------- |
| 3J9Q Chain:S ((3-168)) | --------IPQTLTNTNLFIDGVSF-AGDVPSLTLPKLAVKTEQYRAGGMD--------------APVSIDMGLEAMEAKFSTNGARREALNF----FGLADQSAFNGVFRGSFKGQKGASVPVVATLR-GLLKEVDPGDWKAGEKAEFKYAV-AVSYYKLEVDGREVYEIDPVNGVRAINGVDQLAGMRNDLGL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3J9Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 27463 for 1053 contacts (26.1/contact) +
2D Compatibility (PS) -15694 + (NN) 5014 + (LL) 2240
1D Compatibility (HY) -2400 + (ID) 1150
Total energy: 15473.0 ( 14.69 by residue)
QMean score : 0.096
|
|
|