Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ----MTKYQETAKAILAAVGGEKNIQHVTHCVT-RLRLVLDNDEIVNDQVIKTIP--NVIGVMRKNDQYQIILGNDVNNYYNAFLALGHFENTTREFSSQKKSSILEKLIETIAGVITPLIPALLGGGMLKVIGILLPMLGIASSSSQTVAFINFFGDAAYYFMPIMIAYSAASRFKVTPVLAATVGGILLHPAFVTMVAEGKPLSLFGAPVTLASYGSSVIPILIMVFLMQYIERWINKIVPSVMKSFLQPTLIILISGFLALVVVGPLGVIIGKGLSSAMLSIYHVAPWLALSILGAIMPLVVMTGMHWAFAPIFLAASVATPDVLILPAMLASNLAQGAASLAVAVKAKQKQTRQVAFAAGLSALLAGITEPALYGVTLKFKKPLYAAMISGGLVGAYIGL------VNIASYTFVVPSIIGLPQYINPQGGNNFSNAVIAAIATIILTF-IITWFLGIDEGENEKSSINAQEHTHIRSGLSKKETLYSPMVGNVLPLSKVPDETFSSKLLGEGLAITPSVGEVYAPFDGEIISLFPTKHAIALKDDKGVEVLIHIGIDTVELNGEGFEQLVKVGDFVKRGQLLLRMDIDFISSKGYSLISPVVVTNSIDQLEIIVKDAETMVTNEDDLLVIL |
3ODM Chain:A ((24-560)) | MKIPCSMMTQHPDNVETYISIQQEPAEAIKGLTPQDKGGLGIEEVMIDFEGKLTPYHQTSQIALGLISNGIIPGKDV-------------RVTPRIPNANKES--VFRQLMSIMSIIETNVQSKELTGTPAISEVVVPM---IETGKEISEFQDRVNSVVDMGNKNYKTKLDLNSVRIIPLV------------------------------------EDVPALANIDRILDEHYEIEKS------KGHILKDLRIMIARSDTAMSYGLISGVLSVLMAVDGAYKWGEKHGVTISPILGCGSLPFRGHFSEENIDEILATYSGIKTFTFQSALRYDHGEEATKHAVRELKEKIAQSKP----RNFSEEDKDLMKEFIGICSKHYLQTFLKVIDTVSFVSDFIPKNRDRLTANLDNVADLVKDEVLKQEILSIDNSKEYAVPRAISFTGAMYTLGMPPELMG------MGRALNEIKTKYGQEGIDKLLEIYPILRKDLAFAARFANGGVSKKIID------------------------EEARQEYKEDMKYVNEILNLGLD---------YDFLNENEFYHTLLKTTKPIIMHLMGLEENVMRN-----STEELKILNEWIVRMGKVRGSIG--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ODM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -350039 for 4654 contacts (-75.2/contact) +
2D Compatibility (PS) -52547 + (NN) 1090 + (LL) 7624
1D Compatibility (HY) -7200 + (ID) 3000
Total energy: -404072.0 ( -86.82 by residue)
QMean score : 0.161
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