Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MRIIVPATSANIGPGFDS-IGVALSK----YLSIEVLEESTEWLVEHNLVNIPKDHTNLLIQTALHVKSDLAPH-----RLKMFSDIPLARGLGSSSSVIVAGIELANQLGNLALSQKEKLEIATRL------EGHPDNVAPAIFGDLVISSIVKNDIKSLEVMFPDSS-----FIAFIPN--YELKTSDSRNVLPQKLSYEDAVASSSVANVMVASLLKGDLVTAGWAIERDLFHERYRQPLVKEF----------GVIKQISTQNGAYATYLSGAGPTVMVLCSKEKEQPIVTELSKLC-LDGQIQVLNIERKGVRVEKR-------------- |
| 1H72 Chain:C ((1-296)) | MKVRVKAPCTSANLGVGFD-VFGLCLK-EPYDVIEVEAIDDKEIIIEVDDKNIPTDPDKNVAGIVAKKMIDDFN--IGKGVKITIKKGVKAGSGLGSSAASSAGTAYAINELFKLNLDKLKLVDYASYGELASSGAKHADNVAPAIFGGFTMVTNY---EPLEVLHIPI--DFKLDILIAIPNISINTKEAREI--LPKAVGLKDLVNNVGKACGMVYALYNKDKSLFGRYMMSDKVIEPVRGK-----LIPNYFKIKEEVKDK------VYGITISGSGPSIIAFPKEEFIDEVENILRDYYE--------------------NTIRTEVGKGVEVV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1H72.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -120079 for 2065 contacts (-58.1/contact) +
2D Compatibility (PS) -26636 + (NN) -7166 + (LL) 2280
1D Compatibility (HY) -8800 + (ID) 3100
Total energy: -163501.0 ( -79.18 by residue)
QMean score : 0.326
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