Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MDLFLSLERKFKAASDKEVSKQQEAYLRHHFKCYGIKSPERRMLYKELIKAAKRQAKIDWQLLDKCW---------QSDYREYHHFVLDYLLAMSQFLTYN----------DCSRLEFYARHQQWWDSIDVLTKIFGNLS-----LKDDKVMNLLSEWSLDQD---FWMRRLAIEHQLGFKEKTNTDILSLFILRNTGSQEFFINKA----IGWALRD----YSKYNKVWVKDFISNHYDELSTLSIREGSKYL-------- |
| 1KC6 Chain:A ((1-257)) | SFIKPIYQDINSILI---GQKVKRPAAG------------EPFEKLVYKFLKENLSDLTFKQYEYLNDLFMKNPAIIGHEARYKLFNSPTLLFLLSRGKAATENWSIENLFEEKQNDTADILLVKDQFYELLDVKTRNISKSAQAPNIISAYKLAQTCAKMIDNKEFDLFDINYLEVDWELN-GEDLVCVSTSFAELFKSEPSELYINWAAAMQIQFHVRDLDQGFNGTREEWAKSYLKHFVTQAEQRAISMIDKFVKPFKKYIL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KC6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -55686 for 1374 contacts (-40.5/contact) +
2D Compatibility (PS) -20795 + (NN) 1251 + (LL) 1288
1D Compatibility (HY) -9600 + (ID) 1700
Total energy: -85242.0 ( -62.04 by residue)
QMean score : 0.263
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