Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKGLKSLYTLLGLISLTLLGFVAVISKQH---IYLPSFNWLDWDFNLPSPIDV-GMYHYFFWGALV--------------LFV-------IVLLAI---LVVLFYPRRYTEYKLADKTG--KLMLKKSAIEGFVKTEVLKTGLMKSLSVTA------------------------HLYK-----KKVKVDVKGLLTSRTNVPEQLEHIQSD-------------VELGLKEFFGLEKKMNTRVFVKQVEEENVGNAKTNKSRVE-------- |
| 4QCC Chain:A ((5-274)) | --TKLPLIAILRGITPDEALAHVGAVIDAGFDAVEIP-LNSPQWEQSIPAIVDAYGDKALIGAGTVLKPEQVDALARMGCQLIVTPNIHSEVIRRAVGYGMTVCPGCATATEAFTALEAGAQALKIFPSSAFGPQYIKALKAVLPSDIAVFAVGGVTPENLAQWIDAGCAGAGLGSDLYRAGQSVERTAQQAAAFVKAYREAQKQKEQRQDQKSAYALGASLGRYMENSLKEQEKLGIKLDKDQLIAGVQDAFADKSKLSDQEIEQTLQAFEA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QCC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -131474 for 1197 contacts (-109.8/contact) +
2D Compatibility (PS) -19536 + (NN) 2503 + (LL) 152
1D Compatibility (HY) -1200 + (ID) 2100
Total energy: -151655.0 ( -126.70 by residue)
QMean score : 0.347
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