Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKN-KGLIATLILLTILVVGELFYNKSEKHLNLSEKQVVKIGILQYVPHDALDAIEKG-VEDGLAQEGYKGKKVKLTVLNAEADQSKIQAMSKQLVNHHND--ILIGIATPSAQGLAASTKDTPIIMGAVSDPLGAKLVTNMKKPTTNVTGLSNVVPTKQTVQLIKDITPNVKRIGILYASSEDNSVSQVTEFTKYA-QKAGLEV-LKYSVPSTNEIKTSMS-VMTK-------KVDAV-FVPQD-NTIA-SAFRTV-IVAANQANIPVYSSVD-TMVEQGSIASVAQSQYGLGLETAKQAIKVLRGKPVKDVPVKVIDTGKPSLNLKAAKHLGIKIPKKIMKQAEITVKVDD--- |
| 3BBL Chain:A ((3-283)) | LSFMIGYSWT-------------------------------QTEPGQVNHILDQFLSSMVRE-AGAVNYF-----VLPFPFSEDRSQIDIYRDLIRSGNVDGFVLSSINYNDPRVQFLLKQKFPFVAFGRSNP----------DWDFAWVDIDGTAGTRQAVEYLIG--RGHRRIAILAWPEDSRVGNDRLQGYLEAMQTAQLPIETGYILRGEGTFEVGRAMTLHLLDLSPERRPTAIMTLNDTMAIGAMAAARERGLTIGTDLAIIGFDDAPMVQYLFPPLSSVRQPIAEAGRKCIELLVAIVEGREPE--------------------------QKHILLQPSLIIRASEGHH |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BBL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -17405 for 2030 contacts (-8.6/contact) +
2D Compatibility (PS) -28018 + (NN) -6416 + (LL) 5888
1D Compatibility (HY) -3200 + (ID) 2000
Total energy: -51151.0 ( -25.20 by residue)
QMean score : 0.244
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