Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAIRKLVVMSDSHGDRDIVKDIKNHYL-GKVDAIFHNGDSELPSSDPIWE----GIHVVTGNCDYDSGYPEVLVTKIDNTVIVQTHGHLH----QINFT----WDKLDLLAQQEDADICLYGHLHRADAWKNGKTIFINPGSVLQPRGPINEKLYAVVTITDSKVLVEYYTRQHQPYPNLTKEFSR
1S3L Chain:A ((26-190))
---MKIGIMSDTHDHLPNIRKAIEIFNDENVETVIHCGDFVSLFVIKEFENLNANIIATYGNNDGERCKLKEWLKDINEENIIDDFISVEIDDLKFFITHGHHQSVLEMAIKSGLYDVVIYGHTHERVFEEVDDVLVINPGECCGYLT--GIPTIGILDTEKKEYREIVL----------------
General information:
TITO was launched using:
RESULT:
Template:
1S3L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -70717 for 1216 contacts (-58.2/contact) +
2D Compatibility (PS) -16675 + (NN) -6977 + (LL) 1388
1D Compatibility (HY) -5600 + (ID) 1350
Total energy: -99931.0 ( -82.18 by residue)
QMean score : 0.339
(partial model without unconserved sides chains):
PDB file :
Tito_1S3L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S3L-query.scw
PDB file :
Tito_Scwrl_1S3L.pdb
: