Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGRKWANIVAKKTAKDGANSKVYAKFGVEIYVAAKQGEPDPESNSALKFVLDRAKQAQVPKHVIDKAIDKAKGNTDETFVEGRYEGFGPNGSMIIVDTLTSNVNRTAANVRTAYGKNGGNMGASGSVSYLFDKKGVIVFAGDDADTVFEQLLEADVDVDDVEAEEGTITVYTAPTDLHKGIQALRDNGVEEFQVTELEMIP--Q---SEVVLEGDDLETFEKLIDALESDDDVQKVYHNVADF |
2FGC Chain:A ((40-101)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------PGVMRKVANLFARRG-FNISSITVGESETPGLSRLVIMVKG-DDKTIEQIEKQAYKLVEVVKVTPIDPLP |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FGC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -207 for 289 contacts (-0.7/contact) +
2D Compatibility (PS) -6240 + (NN) -2304 + (LL) 9848
1D Compatibility (HY) -1200 + (ID) 500
Total energy: -603.0 ( -2.09 by residue)
QMean score : 0.660
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