Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNHQILQNYINSHNLPIIEKDYHKYLTFESLEEDYTYILKDGIVKQSVLSKYGTEFNLRYVTGLEITSILNTDYSQHMG---EPYNVRIESETAHFYKVRRSTFLKDINNDIELQGYVKDFYHNRLEKSMKKMQCMLTNGRIGAISTQLYDLSKMFGEERDNGDIYINFVITNEELGKFCGISTGSSVSRILKQLKDDHIIRIEKQHIIITNVEKLKDHIVF |
3DKW Chain:A ((32-226)) | --------------SDLVNLDKGAYVFRQGEPAHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTFAEA----MMFMDTPNYVATAQAV-VPSQLFRFSNKAYLRQLQDNTPLALALLAKLSTRLHQRIDEIETLSLKNATHRVVRYLLTLAAHAPG----ENCRVEIPVAKQLVAGHLSI-QPETFSRIMHRLGDEGIIHLDGREISILDRERLECFE-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DKW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -59367 for 1189 contacts (-49.9/contact) +
2D Compatibility (PS) -19808 + (NN) -315 + (LL) 1240
1D Compatibility (HY) -7200 + (ID) 1500
Total energy: -86950.0 ( -73.13 by residue)
QMean score : 0.246
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