Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTQLNSSFMIGKVEIPHRTVLAPMAGITNSAFRTIAKEFGAGLVVMEMISEKGLLY-NNEK--------------------T-LHMLH-I---DENEHPMSIQLFGGDAEGLKRAADFIQSNTKA-DIVDINMGCPVNKVVKNEAGAKWLRDPEKIYHIVKEVTSVLDIPLTVKMRTGWSDSSNAIENALAAESAGVSALAMHGRTR-------------------EQMYTGT----CDHETLGKVAKAVT-SIPFIANGDIRTVHDAKFMIEEIGADAIMVGRGARS-NPYIFTQINHFFETGEILPDLPFEKMLDVAEDHLTRLVNLKGETIAVREFRGLAPHYLRGKSGAAKIRGAVSRAETLAEVQELFAGLR |
| 1JUB Chain:A ((2-289)) | -----LNTTFANAKFANPFMNASGVHCMTIEDLEELKASQAGAYITKSSTLEKREGNPLPRYVDLELGSINSMGLPNLGFDYYLDYVLKNQKENAQEGPIFFSIAGMSAAENIAMLKKIQE-SDFSGITELNLSCPNVPGE-----PQLAYDFEATEKLLKEVFTFFTKPLGVKLPPYFDL-VHFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLKPEIQIIGTGGIETGQDAFEHLL-CGATMLQIGTALHKEGPAIFDRIIKELEEIMNQKGYQSIADFHGKLKSL------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JUB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -169870 for 1986 contacts (-85.5/contact) +
2D Compatibility (PS) -25273 + (NN) -6765 + (LL) 4116
1D Compatibility (HY) -2800 + (ID) 2000
Total energy: -202592.0 ( -102.01 by residue)
QMean score : 0.381
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