Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKILFFGEPLIRITPKENDYFADSISTKLFYGGSEVNTARALQGFGQDTKLLSALPNNPIGNSFLQFLKAQGIDTHSIQW-VGERVGLYFLEDSFACRKGEVVYDRDHSSLHDFRINQIDFDQLFEGVSLFHFSGITLSLDESIQEITLLLLKEAKKREITISLDLNFRSKLIS-PKNAKILFSQFATFADICFGIEPLMVDS-QDTTFFNRDEATIEDVKERMISLINHFDFQVIFHTKRLQDEWGRNHYQAYIANRKQEFVTSKEITTAVNQRIGSGDAFVAGALYQLLQHS-----DSKTVIDFAVASASLKCALEGDNMFETV-TAVNKVLNQSKDIIR |
| 1TYY Chain:A ((25-328)) | -NKVWVIGDASVDLVPEKQ------NSYLKCPGGASANVGVCVARLGGECGFIGCLGDDDAGRFLRQVFQDNGVDVTFLRLDADLTSAVLIVN--------SFTYLVHPGADTYVSPQDLP---PFRQYEWFYFSSIGLTDRP-AREACLEGARRMREAGGYVLFDVNLRSKMWGNTDEIPELIARSAALASICKVSADELCQLSGAS-----------HWQDARYYLRD-LGCD-----TTIISLGADG---ALLITAE-GEFHFPAPRVDVVDTTGAGDAFVGGLLFTLSRANCWDHALLAEAISNANACGAMAVTAKGAMTALPFPDQLNTFLS------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TYY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -122705 for 2628 contacts (-46.7/contact) +
2D Compatibility (PS) -30290 + (NN) -4996 + (LL) 3264
1D Compatibility (HY) -12400 + (ID) 2500
Total energy: -169627.0 ( -64.55 by residue)
QMean score : 0.420
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