Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MADVKVVNNEDSRGQK---QDLKAKLFHIKIGSVPLPVYVCLALLILLAGFLQKLP----VNMLGGFAVILTMGWFLGTIGASIPGFK--NFGGP--------------------AILSLLVPSILVFFNLINKNVLESTNMLMKQANFLYFYIACLVSGSILGM---NRKMLIQGLLRMIFPML-------LGMVCAMMVGTF-----------------------------VGVIL------GLEWRHTLFYIVTPVLAGGIGEGILPLSLGYSSITGVASEQLVAQLIPATIIGNFFAIL-------CTALLNRL--GEKKPHLSGQGQLVRLNKGEDMSDIIADHSGP-------IDVKKMGGGVLTACSLFIFGHLLQQLTGF--------PGPVLMIVAAA-----------ILKYINVIPRETQNG-AKQLYKFISGNFTFPLMAGLGLLYIPLKDVVATLSIQYFIVVISVVFTVISVGFFVSRFLNMNPVEAGIISACQSGMGGTGDVAILSTADRMNLMPFAQVATRLGGAITVITMTAILRMLF |
| 4U1C Chain:C ((6-549)) | QEDFFTRLQTIIDSRGKKTVNQQSLISTLEELLTVAEKPYEFIMAYLTLIPSRFDASANLSYQPIDQWKSSFNDISKLLSILDQTIDTYQVNEFADPIDFIEDEPKEDSDGVKRILGSIFSFVERLDDEFMKSLLNIDPHSSDYLIRLRDEQSIYNLILRTQLYFEATLKDEHDLERALTRPFVKRLDHIYYKSENLIKIMETAAWNIIPAQFKSKFTSKDQLDSADYVDNLIDGLSTILSKQNNIAVQKRAILYNIYYTALNKDFQTAKDMLLTSQVQTNINQFDSSLQILFNRVVVQLGLSAFKLCLIEECHQILNDLLSSSHLREILGQQSLHRISLNSSNNASADERARQCLPYHQHINLDLIDVVFLTCSLLIEIPRMTAFYSGIKVKRIPYSPKSIRRSLEHYDKLSFQGPPETLRDYVLFAAKSMQKGNWRDSVKYLREIKSWALLPNMETVLNSLTERVQVESLKTYFFSFKRFYSSFSVAKLAELF---DLPENKVVEVLQSVIAELEIPAKLNDEKTIFVVEKGDEITKLEEAMVKL---------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4U1C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -305606 for 2952 contacts (-103.5/contact) +
2D Compatibility (PS) -44831 + (NN) -20689 + (LL) 1756
1D Compatibility (HY) -15200 + (ID) 3350
Total energy: -387920.0 ( -131.41 by residue)
QMean score : 0.173
|
|
|