Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEELLERVFSFSDV--------DKLIDFISYELQKPVILESADFFLLAYNSYYINHFDSANQQTIFSKKCPVQIFERFLKD--GIIEKLKTEPEPFRVNK-------------------------------------IESIG----LNQRVVVSAKHKGEVMGYIWIQELDQNLT---DEELDFLYETSF--HVGKIIYKTNKLKQEKEEKAEDLIKRAIYQQFTSEKEL------RREAERINTVLP----------SMFSVVILHAANGDGEAVEDLKENIRSYLNLRDKVSHVLTIESNIVIVVASFSQKSSVSSAASEFINKLLTHFHFQKIP-------------------------TPIYIGIGNEYNHLLKLGKSYTEALEVIKAAEITGNQENIPY----------EYAKLG-----------IYRYLESIEQ--KNEFLEYEN--KDLALL----KAKDEESSTELLKTLEIYLLN------NCKTKPAAEQLFIHQNTLNYRIKQITEMTSI--DLSDFRTRCQLYLDLMLMKKK------
4U1C Chain:C ((251-794))QEDFFTRLQTIIDSRGKKTVNQQSLISTLEELLTVA---EKPYEFIMAYLTLIPSRFDASANLS----YQPIDQWKSSFNDISKLLSILDQTIDTYQVNEFADPIDFIEDEPKEDSDGVKRILGSIFSFVERLDDEFMKSLLNIDPHSSDYLIRLRDEQSIYNLILRTQLYFEATLKDEHDLERALTRPFVKRLDHIYYKSENLIKIMETAAWNIIPAQFKSKFTSKDQLDSADYVDNLIDGLSTILSKQNNIAVQKRAILYNIYYTALNKDFQTAKDMLLTSQVQTNINQFDSSLQILFNRVVVQLGLSAFKLCLIEECHQILNDLLSSSHLREILGQQSLHRISLNSSNNASADERARQCLPYHQHINLDLIDVVFLTCSLLIEIPRMTAFYSGIKVKRIPYSPKSIRRSLEHYDKLSFQGPPETLRDYVLFAAKSMQKGNWRDSVKYLREIKSWALLPNMETVLNSLTERVQVESLKTYFFSFKRFYSSFSVAKLAELFDLPENKVVEVLQSVIAELEIPAKLNDEKTIFVVEKGDEITKLEEAMVKL


General information:
TITO was launched using:
RESULT:

Template: 4U1C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 1409 -147000 -104.33 -363.86
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain C : 0.67

3D Compatibility (PKB) : -104.33
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.330

(partial model without unconserved sides chains):
PDB file : Tito_4U1C.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4U1C-query.scw
PDB file : Tito_Scwrl_4U1C.pdb: