Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-------------------MLDVHKDIKKIFHEEQVLAEAAARYGFSKDQVRFLADAENYVYECMK---DNQPYILKITHTIRRSSDYMMGEMEWLRHLAIGGISVAK-PLPSLNGKDVEAVPDGNGGSFLLRVYEKAPGQKVDESDW-NETLFYELGRYTGSMHSLTKSYKLSNPAFKR-------------------QEWDEEEQLKLRKYVPEDQIK---VFQQADSLMNELRRLPKSQDNYGLVHADLHHGNFNWDHGK---ITAFDFDDIGYNWFVNDISILLYNVLWYPVVPYDDKAAFTEEFMTHFMKGYWEE--NELDPAWLMIIPDFLRLRHML--IYGLLHQMFDLNTIGEEEKEMLAGFRRDIENGTPITAFDFSALV
2QG7 Chain:A ((50-458))YPITESNLRILEGEDRSEKAKELLKKYVSNVFENEKTLYIYCKYVMLHYGKDLVNPNEVDSLEFQIINGTNILIKVKDMSKQAKYLIRLYGPTDEIINREREKKISCILYNKNIAKKIYVFFTNG-------RIEEFMDGYALSREDIKNPKFQKLIAKNLKLLHDIKLNENLYKELQVTQKVPGTRPSFLWNTIWKYFHLLNEERKKICSFDAKANILKLIDFDVLRDSIVEVESLCKRENSPIVLCHCDLLSSNIINTVGEGDSISFIDFEYSCPMERAYDIANHFNEYAGFNC---DWDLTPSKEEEYHFIMHYLGTDDEELINQLIREIQPFYICSHINWGLWSLLQGMHSFDFINYGMTRLTASCLPIFRSKV-----------


General information:
TITO was launched using:
RESULT:

Template: 2QG7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1392 -115996 -83.33 -368.24
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain A : 0.57

3D Compatibility (PKB) : -83.33
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.214

(partial model without unconserved sides chains):
PDB file : Tito_2QG7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2QG7-query.scw
PDB file : Tito_Scwrl_2QG7.pdb: