Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKALIYARVSTNKEQQETSLKRQEEELTAIAAENGMEVVKVISEKASGYE-MDRDGVFELLDEIKNADIDVILVQDETRLGRGNAKI-ALLHCIYREGVKVYTTAHRGELE-------LSEADSMVLEIVSIVEEYQRKIHNMKIRRGMKRAVKNGFKPQKNLKNQHGNSGKEKIEVPISEIVRLRANKLTFAEIAATLRGFGYDVSKATVHRRFQEYIENEETAE
3PKZ Chain:A ((1-124))-MIIGYARVSSLDQ----NLERQLENLKTFGAE------KIFTEKQSGKSIENRPILQKALNFVEMG--DRFIVESIDRLGRNYNEVIHTVNYLKDKEVQLMITSLPMMNEVIGNPLLDKFMKDLIIRILAMVSEQE-----------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3PKZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 474 -7826 -16.51 -68.05
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -16.51
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.411

(partial model without unconserved sides chains):
PDB file : Tito_3PKZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3PKZ-query.scw
PDB file : Tito_Scwrl_3PKZ.pdb: