Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRKLKIGITCY---P---SVGGSGIIATELGKQLAEKGHEIHFITSSIPFRLNT---YHPNIHFHEVEVNQYAVFK---YPPYDLTLASKIAEV--AERENLDIIHAHYALPHAVCAYLAKQMLKRNIGIVTTLHGTDITVLGY----DPSLKDLIRFAIESSDRVTAVSSALAAETYDLIK-PEKKIETIYNFIDERVYLKKNT-AAIKEKHGILPDEKVVIHVSNFRKVKRVQDVIRVFRNIAG-K--TKAKLLLVGDGPEKSTACELIRKYGLEDQVLMLGNQD--RVEDLYSISDLKLLLSEKESFGLVLLEAMACGVPCIGTNIGGIPEVIKNNVSGFLVDVGDVTAATARAMSILEDEQLSNRFTKAAIEMLENEFSSKKIVSQYEQIYADLAEPE
3C48 Chain:A ((19-428))-SHMRVAMISMHTSPLQQ---GMNVYILSTATELAKQGIEVDIYTRATRPSQGEIVRVAENLRVINIAAGPYEGLSKEELPTQLAAFTGGMLSFTRREKVTYDLIHSHYWLSGQ-VGWLLRDL--WRIPLIHTAHTLAAVKNSYDTPESEARRICEQQLVDNADVLAVNTQEEMQDLMHHYDADPDRISVVSPGADVELYSPG--TERSRRELGIPLHTKVVAFVGRLQPFKGPQVLIKAVAALFDRDPDRNLRVIICGGPS--DTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADIVAVPSFNESFGLVAMEAQASGTPVIAARVGGLPIAVAEGETGLLVDGHSPHAWADALATLLDDDETRIRMGEDAVEHA-RTFSWAATAAQLSSLYNDAIAN-


General information:
TITO was launched using:
RESULT:

Template: 3C48.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1949 -3905 -2.00 -10.73
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain A : 0.73

3D Compatibility (PKB) : -2.00
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.570

(partial model without unconserved sides chains):
PDB file : Tito_3C48.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3C48-query.scw
PDB file : Tito_Scwrl_3C48.pdb: