Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGKNEILWGIAPIGWRNDDMPEIGAGNTLQHLLSDIVVARFQGTEVGGF---------FP----EPAILNKELKLRNLRIAGKWFSSFILRDG---LGEAAKTFTLHCEYLQQVNADVAVVSEQTYSVQSLEKNVFTEKPHFTDDEWERLCEGLNHLGEIAAQHGLKLVYHHHLGTGVQT----------AEEV-DRLMAGTDPAHVHLLYDTGHAYISDGDYMGMLEKHIGRIKHVHFKDARLNVMEQCRLEGQSFRQSFLKGMFTVPGDGCIDFREVYQLLLKHSYSGWI-VIEAEQDPDVANPLEYALIARNYIDQQLLDLA
3OBE Chain:A ((19-303))---AGKKMGLQTYSLGQEL------LQDMPNGLNRLAKAGYTDLEIFGYREDTGKFGDY-TTFIASKDYKKMVDDAGLRISSSHLTPSLREYTKENMPKFDEFWKKATDIHAELGVSCMVQPSLP--------------RIENEDDAKVVSEIFNRAGEITKKAGILWGYHNHSNEFKRVLKAGEKPEPKGTYIEELFLKNTDPDKVMFELDVYWAVMGQQDPVEWMENYPNRFKLLHIKDRWI-----------------------IGDSGMMNFPNIFKKAYEIGILGYYVELEGDKKGR--TQFEGVEKSAAYLQAAPF---


General information:
TITO was launched using:
RESULT:

Template: 3OBE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1231 9112 7.40 37.19
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : 7.40
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.450

(partial model without unconserved sides chains):
PDB file : Tito_3OBE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3OBE-query.scw
PDB file : Tito_Scwrl_3OBE.pdb: