Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRIADVLRNKGAAVVTINPDATVGELLAGLAEQNIGAMVVVGAEG-VVGIVSERDVVRQLHTYGASVLSRPVAKIMSTTVATCTKSDTVDKISVLMTENRVRHVPVLDGKKLIGIVSIGDVVKSRMGELEAEQQQLQSYITQG
2RC3 Chain:A ((7-131))
-TVKHLLQEKGHTVVAIGPDDSVFNAMQKMAADNIGALLVMKD-EKLVGILTERDFSRKSYLLDKPVKDTQVKEIMTRQVAYVDLNNTNEDCMALITEMRVRHLPVLDDGKVIGLLSIGDLVKDAIS----------------
General information:
TITO was launched using:
RESULT:
Template:
2RC3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -103787 for 897 contacts (-115.7/contact) +
2D Compatibility (PS) -13496 + (NN) -5903 + (LL) 1868
1D Compatibility (HY) -14000 + (ID) 2450
Total energy: -137768.0 ( -153.59 by residue)
QMean score : 0.566
(partial model without unconserved sides chains):
PDB file :
Tito_2RC3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RC3-query.scw
PDB file :
Tito_Scwrl_2RC3.pdb
: