Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDLRQLRYFIALAEHRSFVRAADAMGITQPAFSRSIQGLEQELGCQLVDRGSKDLRPTPEGQVVLQHALSLVQGSANLIHEIAQLNKLDAGELRFGSGPAPAQQLVPDAVADFINRHPRVQISLDVDNWEKLSRALLREEIEFFVADIRDFEADPNFQTRPLTPRRGQFFCRPQHPLLGK-DSLSTNDLFNYPLASTLIPPGIRK--LL-ANLSGKIDFAANIRCENMHALIRIVRQTDAIGIASDETLRPYLQR-GELQPLQWRNLPQNLDSLSARCGIISRSGYRLSAAAKAMIETLVELDQAQHAAA |
2QL3 Chain:A ((3-207)) | ----------------------------------------------------------------------------------------VAGPIAVGCYPALGPTILPSMLYAFTAEYPRASVEFREDTQNRLRTQLEGGELDVAIVYDLDL--SPEWQTVPLMTREPMVVLGAEHPLAGVDGPVRLADLAEHPMVLLDAPPSTNHAMDVCREAGF-APRVA-YRTANFETARAFVGRGLGWTLLLQRPRVDVTYEGLPVVVKPIAEPK----PASVAVVVAWHQEATLSRVARAFIRFVTA--------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2QL3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -100198 for 1553 contacts (-64.5/contact) +
2D Compatibility (PS) -20902 + (NN) -10844 + (LL) 8436
1D Compatibility (HY) -4400 + (ID) 1950
Total energy: -129858.0 ( -83.62 by residue)
QMean score : 0.364
|
|
|