Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDAPLRIALIGAGNMGR-QHYHRLQRIAGARLCAVADP---QGQAFAADTGVPWFGDHRRLLEEARPQAAIVANPNNLHVATALDCLAAGVPLLLEKPVGVQLDEVSELVAVARRSGVPLLVGHHRRHNPLVVRARQLIAEGALGRLLSVTALWQLKKPDSYF---EVAWRREPGAGMLLTNLIHDLDLLRHLCG-EVREVQALAGNAIRGLPNEDNIALLLRFANGALGSLTGCDAAAAPWSW------------------ELAAGENPVYPRQAEQPCYLLAGTEGALSLPQLRRWRYAEARQGWHDPLAASEEAVATGDP---------------LQRQLEHFVRVARGEEAPLMDATDAARTLALVEAVREAARSGRACAPASF |
| 3MOI Chain:A ((1-387)) | --MKIRFGICGLGFAGSVLMAPAMRHHPDAQIVAACDPNEDVRERFGKEYGIPVFATLAEMMQHVQMDAVYIASPHQFHCEHVVQASEQGLHIIVEKPLTLSRDEADRMIEAVERAGVHLVVGTSRSHDPVVRTLRAIVQEGSVGRVSMLNCFNY--TDFLYRPRRPEELDTSKGGGIIYNQLPHQIDSIKTITGQRITAVRAMTGRLDPKRPTEGNCAAMLTLEDGACAVMVYSGYDHFDSDEMHFWLAEGGRAKQPNHGGARKVLRQLEGDEAELRRSRYGFGGPISKSDRKQPHFGVMLVTCEHADLRASPEGVLVYGDEGVREVPAITGRGPFSQGDTIDELRDAIAGVAPALRDARWGKDTLEVCLAVLESSATGRQVER--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MOI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -175250 for 2873 contacts (-61.0/contact) +
2D Compatibility (PS) -36927 + (NN) -17978 + (LL) 620
1D Compatibility (HY) -12000 + (ID) 3600
Total energy: -245135.0 ( -85.32 by residue)
QMean score : 0.401
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