Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAISMTEAAAKHVQRSLEGRGKGEGIRLGVRTTGCSGLAYVLEFVDELAAEDLVFESH-GVKVIIDPKSLVYLDGTELDFTREGLNEGFKFNNPNVRGECGCGESFNV--------
2QGO Chain:A ((4-126))
LNIKFTDNAVDYLKRRE-ILDKILILITDDGGGKYSIHFSIIWLDKVDPDYPVKIANEQNVKIYTSDFDKTMLGP-NMVMDYNAGSLSLSSDEGLLDGSVDIGNGAALLKANKNVQ
General information:
TITO was launched using:
RESULT:
Template:
2QGO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39356 for 777 contacts (-50.7/contact) +
2D Compatibility (PS) -11336 + (NN) -4059 + (LL) 156
1D Compatibility (HY) -3600 + (ID) 550
Total energy: -58745.0 ( -75.60 by residue)
QMean score : 0.267
(partial model without unconserved sides chains):
PDB file :
Tito_2QGO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QGO-query.scw
PDB file :
Tito_Scwrl_2QGO.pdb
: