Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence--------------------------------------------------MDSINTRIAEELSALPSGRVQPQQVAAAVAL---LDEGSTVPFIARYRKEVTGS-------LDDTQLRMLEERLRYLRELEERRGAILASIEEQGKLTPELARDIKLADTKTRLEDLYLPYKQKRRTK----------------------GQIALEAGLGALADALFDDPTLVPESEAARFVDAEKGFADVKAVLEGAKYILMERFAEDATLLDKLRVFMKNEATLTARVVPGKEQEGAKFSDYFEHDEPLK------SAPSHRALAIFRGRNEGVLSASLKVGEEAPGTLHPCEVMIAERFGLSNQGRAADKWLAEVVRWTWKVKLYTHLETDLFGELRDGAEDEAISVFARNLHDLLLAAPAGPRATLGLDPGLRTG-----------VKVAVVDATGKLLDTATVYPHAP-KNQWDQTLAVLAALCAKHQVELIAIGNGTASRETDKLAGELIKKYP--------GMKLTKIMVSEAGASVYSASELAAKEFPELDVSLRGAVSIARRLQDPLAELVKI---EPKSIGVGQYQHDVSQLKLARSLDAVVEDCVNAVGVDVNTA-----SAALLARISGLNSTLAQNIVAHRDANGA-FRTRDELKKVSRLGEKTFEQAAGFLRVMNGDNP----LDASAVHPETYPLVQRIAADTERDIRSLIGDSAFLKRLDPKKFTDETFGLPTVTDILKELDKPGRDPRPEFKTAEFQEGVESLKDLKPGMVLEGVVTNVTNFGAFVDIGVHQDGLVHISALSEKFVKDPYEVVKAGDIVKVKVMEVDIPRNRVGLSMRMSDTPGEKVEGQRGGRPTGSGQPRQERGAPRGQSAPPANNAMAALFANAKQLKKK
3PSF Chain:A ((298-1248))DIYDLEDLKKNLMTEGDMKIRKTDIPERYQELRAGITDYGNMSSEDQELERNWIAEKISVDKNFDANYDLTEFKEAIGNAIKFITKENLEVPFIYAYRRNYISSREKDGFLLTEDDLWDIVSLDIEFHSLVNKKDYVQRFYAELHIDDPIVTEYFKNQNSLQDIYDYLEFKYANEINEMSYEKFKASPLYQAVSDIGISAEDVGENISSQHQIHPPVDHPSSKPVEVIESILNANSGDLQTKLAIDTVQKYYSLELSKNTKIREKVRSDFSKYYLADVVLTAKGKKEIQKGSLYEDIKYAINRTPMHFRRDPDVFLKMVEAESLNLLSVKLHMSSQAQYIEHLFQIALETT-NTSDIAIEWNNFRKLAFNQAMD-KIFQDISQEVKDNLTKNCQKLVAKTVRHKFMTKLDQAPFIPNVRDPKIPKILSLTCGQGRFGADAIIAVYVNRKGDFIRDYKIVDNPFDKTNPEKFEDTLDNIIQSCQPNAIGIN--GPNPKTQKFYKRLQEVLHKKQIVDSRGHTIPIIYVEDEVAIRYQNSERAAQEFPNKPPLVKYCIALARYMHSPLLEYANLTSEEVRSLSIHPHQNLLSSEQLSWALETAFVDIVNLVSVEVNKATDNNYYASALKYISGFGKRKAIDFLQSLQRLNEPLLARQQLITHNILHKTIFMNSAGFLYISWNEDLEHDQLDSTRIHPEDYHLATKVAADA----------------------------LEYDPDTIAEKEEQGTMSEFIELLREDPDRRAKLESL------------------------------NLESYAEELEKNTGLRKLNNLNTIVLELLDGFEELRNDFHPLQGDEIFQSLTGE------------SSKDPSIWDLKQELEDAEEERKLMMAEARAK


General information:
TITO was launched using:
RESULT:

Template: 3PSF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -112089 for 5175 contacts (-21.7/contact) +
2D Compatibility (PS) -76159 + (NN) -38363 + (LL) 2624
1D Compatibility (HY) -15200 + (ID) 6250
Total energy: -245437.0 ( -47.43 by residue)
QMean score : 0.367

(partial model without unconserved sides chains):
PDB file : Tito_3PSF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3PSF-query.scw
PDB file : Tito_Scwrl_3PSF.pdb: