Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTVEKEAPDAHFTVDKQNISLWPREPPPKSGPSLVPGKTPTVRAALICLTLVLVASVLLQAVLYPRFMGTISDVKTNVQLLKGRVDNISTLDSEIKKNSDGMEAAGVQIQMVNESLGYVRSQFLKLKTSVEKANAQIQILTRSWEEVSTLNAQIPELKSDLEKASALNTKIRALQGSLENMSKLLKRQNDILQVVSQGWKYFKGNFYYFSLIPKTWYSAEQFCVSRNSHLTSVTSESEQEFLYKTAGGLIYWIGLTKAGMEGDWSWVDDTPFNKVQSVRFWIPGEPNNAGNNEHCGNIKAPSLQAWNDAPCDKTFLFICKRPYVPSEP
3P5F Chain:D ((5-133))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QGWKYFKGNFYYFSLIPKTWYSAEQFCVSRNSHLTSVTSESEQEFLYKTAGGLIYWIGLTKAGMEGDWSWVDDTPFNKVQSARFWIPGEPNNAGNNEHCGNIKAPSLQAWNDAPCDKTFLFICKRPYVP---


General information:
TITO was launched using:
RESULT:

Template: 3P5F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55747 for 985 contacts (-56.6/contact) +
2D Compatibility (PS) -14121 + (NN) -8492 + (LL) 14532
1D Compatibility (HY) -18000 + (ID) 6400
Total energy: -88228.0 ( -89.57 by residue)
QMean score : 0.173

(partial model without unconserved sides chains):
PDB file : Tito_3P5F.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3P5F-query.scw
PDB file : Tito_Scwrl_3P5F.pdb: