Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MCDAFVGTWKLVSSENFDDYMKEVGVGFATRKVAGMAKPNLIISVEGDLVVIRSESTFKNTEISFKLGVEFDEITPDDRKVKSIITLDGGVLVHVQKWDGKSTTIKKRRDGDKLVVECVMKGVTSTRVYERA
3WBG Chain:A ((21-152))
MVDAFLGTWKLVDSKNFDDYMKSLGVGFATRQVASMTKPTTIIEKNGDILTLKTHSTFKNTEISFKLGVEFDETTADDRKVKSIVTLDGGKLVHLQKWDGQETTLVRELIDGKLILTLTHGTAVCTRTYEKE
General information:
TITO was launched using:
RESULT:
Template:
3WBG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38460 for 940 contacts (-40.9/contact) +
2D Compatibility (PS) -14988 + (NN) -5403 + (LL) 0
1D Compatibility (HY) -12400 + (ID) 4100
Total energy: -75351.0 ( -80.16 by residue)
QMean score : 0.588
(partial model without unconserved sides chains):
PDB file :
Tito_3WBG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3WBG-query.scw
PDB file :
Tito_Scwrl_3WBG.pdb
: