Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSGELANYKRLEKVGEGTYGVVYKALDLRPGQGQRVVALKKIRLESEDEGVPSTAIREISLLKELKDDNIVRLYDIVHS-DAHKLYLVFEFLDLDLKRYMEGI----PKDQPLGADIVKKFMMQLCKGIAYCHSHRILHRDLKPQNLLI----NKDGNLKLGDFGLARAFGVPLRAYTHEIVTLWYRAPEVLLGGKQYSTGVDTWSIGCIFAEMCNRKPIFSGDSE----IDQIFKIFRVLGTPNEAIWPDIVYLPDFKPSFPQWRRK-----DL----SQVVPSLDPRGIDLLDKLLAYDPINRISARRAAIHPYFQES |
| 4F6U Chain:A ((27-339)) | -----------CKVGRGTYGHVYKAKRKDG-KDDKDYALKQIE----GTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASK---VQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF--------------VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQENPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLE- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4F6U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -153018 for 1962 contacts (-78.0/contact) +
2D Compatibility (PS) -27710 + (NN) -9652 + (LL) 1900
1D Compatibility (HY) -28000 + (ID) 5450
Total energy: -221930.0 ( -113.11 by residue)
QMean score : 0.423
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