Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSSSSQFKQLEKLGNGTYATVYKGLNK--TTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHT--ENKLTLVFEFMDNDLKKYMDSRTVG-NTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLI----NKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTND----EEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQ-----RPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYYHHAS |
| 4F6U Chain:A ((27-340)) | ----------CKVGRGTYGHVYKAKRKDGKDDKDYALKQIEG---TGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASK---VQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF--------------VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQENPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKH-KVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLED----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4F6U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -130713 for 2035 contacts (-64.2/contact) +
2D Compatibility (PS) -28980 + (NN) -14167 + (LL) 1644
1D Compatibility (HY) -28400 + (ID) 5000
Total energy: -205616.0 ( -101.04 by residue)
QMean score : 0.439
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