Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKP
2QME Chain:A ((2-137))
MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPHTPILLVGTKLDLRDDKDTIERLRDKKLAP
General information:
TITO was launched using:
RESULT:
Template:
2QME.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -68308 for 975 contacts (-70.1/contact) +
2D Compatibility (PS) -14740 + (NN) -7520 + (LL) 0
1D Compatibility (HY) -20000 + (ID) 5150
Total energy: -115718.0 ( -118.69 by residue)
QMean score : 0.488
(partial model without unconserved sides chains):
PDB file :
Tito_2QME.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QME-query.scw
PDB file :
Tito_Scwrl_2QME.pdb
: