Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLGRNTWKTSAFSFLVEQMWAPLWSRSMRPGRWCSQRSCAWQTSNNTLHPLWTVPVS---VPGGTRQSPINIQWRDSVYDPQLKPLRVSYEAASCLYIWNTGYLFQVEFDDATEASGISGGPLENHYRLKQFHFHWGAVNEGGSEHTVDGHAYPAELHLVHWNSVKYQNYKEAVVGENGLAVIGVFLKLGAHHQTLQRLVDILPEIKHKDARAAMRPFDPSTLLPTCWDYWTYAGSLTTPPLTESVTWIIQKEPVEVAPSQLSAFRTLLFSALGEEEKMMVNNYRPLQPLMNRKVWASFQATNEGTRS |
4G7A Chain:A ((25-248)) | ---------------------------------------EWSYEGEKGPEHWAQLKPEFFWCKLKNQSPINIDKK-YKVKANLPKLNLYYKTAKESEVVNNGHTIQINIKED---NTLNYLG--EKYQLKQFHFHT------PSEHTIEKKSYPLEIHFVHKTE------------DGKILVVGVMAKLGKTNKELDKILNVAPAEE--GEKILDKNLNLNNLIPKDKRYMTYSGSLTTPPCTEGVRWIVLKKPISISKQQLEKLKSVMV---------N-PNNRPVQEINSRWIIEGF--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4G7A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -140248 for 1723 contacts (-81.4/contact) +
2D Compatibility (PS) -23320 + (NN) -8590 + (LL) 5592
1D Compatibility (HY) -14800 + (ID) 3400
Total energy: -184766.0 ( -107.24 by residue)
QMean score : 0.275
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