Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFVLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIPPNATLIFDVELLKLE
3UQI Chain:A ((1-108))
MGVQVVTLAAGDEATYPKAGQVAVVHYTGTLADGKVFDSSRTRGKPFRFTVGRGEVIRGWDEGVAQMSVGQRAKLVCSPDYAYGSRGHPGVIPPNATLTFDVELLRVE
General information:
TITO was launched using:
RESULT:
Template:
3UQI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58384 for 814 contacts (-71.7/contact) +
2D Compatibility (PS) -12078 + (NN) -5998 + (LL) 0
1D Compatibility (HY) -10800 + (ID) 3950
Total energy: -91210.0 ( -112.05 by residue)
QMean score : 0.760
(partial model without unconserved sides chains):
PDB file :
Tito_3UQI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UQI-query.scw
PDB file :
Tito_Scwrl_3UQI.pdb
: