Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPQILIFTYLNMFYFFPPLQILAENLTMVTEFLLLGFSSLGEIQLALFVVFLFLYLVILSGNVTIISVIHLDKSLHTPMYFFLGILSTSETFYTFVILPKMLINLLSVARTISFNCCALQMFFFLGFAITNCLLLGVMGYDRYAAICHPLHYPTLMSWQVCGKLA-AACAIGGFLASLTVVNLVFSLPFCSANKVNHYFCDISAVILLACTNTDVNEFVIFICGVLVLVVPFLFICVSYLCILRTILKIPSAEGRRKAFSTCASHLSVVIVHYGCASFIYLRPTANYVSNKDRLVTVTYTIVTPLL---NPMVYSLRNKDVQLAIRKVLGKKGSLKLYN- |
4TQ3 Chain:A ((15-301)) | ------SKYLRLL---RPVAWLCFLLPYAVGFGF-GITPNASLQHAVLGLLSFAFWMAFSFTINALYDRDVDR-LHDGLNLSMQPLVTGE---------------ISVREAWLYCIAFLALSLATAAAINEKFFLAMLGANIIGYVYSAP--PRFKAWPVMDVICNALAAVLAFYAGLSIGGAEVPIAIYPAA----FFLAATFYIPTAVSDYEFDKKA-------------------------GLKNTPVFFGPERALKSLYPLSAITVILWAYVFLMAERIEIKVISPLIIAYTLIYTFIINSRWDGEKLNVSPNLILTPFGIISALFIAYGFAVISV |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4TQ3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -239886 for 2327 contacts (-103.1/contact) +
2D Compatibility (PS) -27959 + (NN) -4971 + (LL) 6344
1D Compatibility (HY) -18800 + (ID) 2350
Total energy: -287622.0 ( -123.60 by residue)
QMean score : 0.200
|
|
|