Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----MALPITNGTLFMPFVLTFIGIPGFESVQCWIGIPFCATYVIALIGNSLLLIIIKSEPSLHEPMYIFLATLGATDISLSTSI---VPKMLDIFWFHLPEIYFDACLFQMWLIHTFQGIESGVLLAMALDRCVAICYPLRRAIVFTRQLVTYIVVGVTLRPAI------------------LVIPCLLLIKCHLKLYRTKLIYHTYCERVALVKLATEDVYINKVYGILGAFIVGGLDFIFITLSYIQIFITVFHLPLKEARLKV----------FNTCIPHIYVFFQFYLLAFFFIFYSQIWILYP---------IICTYHLVQSLPTGPTIPQPLYLWVKDQTH----------------------------- |
| 4RDQ Chain:A ((1-366)) | TVTYTNRVADARLGTFSQLLLQWKG-----SIYKLLYSEFLIFISLYFAISLVYRLILSESQRLMFEKLALYCNSYAELIPVSFVLGFYVSLVVSRWWAQYESIPWPDRIMNLVSCNVDGEDEYGRLLRRTLMRYSNLCSVLILRSVSTAVYKRFPSMEHVVRAGLMTPEEHKKFESLNSPHNKFWIPCVWFSNLAVKARNEGRIRDSVLLQGILNELNTLRSQCGRLYGYDW------ISIPLVYTQVVTVAVYSFFLACLIGRQFLDPEKAYPGHELDLFVP-VFTFLQFFFYAGWLKVAEQLINPFGEDDDDFETNWLIDRNLQVSLMAVDEMHQDLPILEKDLYWNEPDPQPPYTAATAEYKRPSFLGSTFDIS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RDQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -247740 for 1995 contacts (-124.2/contact) +
2D Compatibility (PS) -28906 + (NN) -1975 + (LL) 500
1D Compatibility (HY) -21200 + (ID) 2500
Total energy: -301821.0 ( -151.29 by residue)
QMean score : 0.092
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